Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.65□□□□□ -0.22
LTBQ06643 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LTBQ06643 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LTBQ06643 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LTBQ06643 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTBQ06643 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LTBQ06643 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LTBQ06643 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 AP001267.2-201ENST00000532619 2086 ntBASIC13.64□□□□□ -0.23
LTBQ06643 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.64□□□□□ -0.23
LTBQ06643 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 KLF2P2-201ENST00000416807 1039 ntBASIC13.64□□□□□ -0.23
LTBQ06643 SOCS2P1-201ENST00000417727 557 ntBASIC13.64□□□□□ -0.23
LTBQ06643 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.64□□□□□ -0.23
LTBQ06643 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 CROCCP4-201ENST00000457096 498 ntBASIC13.64□□□□□ -0.23
LTBQ06643 AC099548.2-209ENST00000480264 625 ntBASIC13.64□□□□□ -0.23
LTBQ06643 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.64□□□□□ -0.23
LTBQ06643 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.64□□□□□ -0.23
LTBQ06643 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.64□□□□□ -0.23
LTBQ06643 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 WFDC1-204ENST00000613603 549 ntBASIC13.64□□□□□ -0.23
LTBQ06643 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 AC104581.4-201ENST00000623126 3052 ntBASIC13.64□□□□□ -0.23
LTBQ06643 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LTBQ06643 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LTBQ06643 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LTBQ06643 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.63□□□□□ -0.23
LTBQ06643 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 AC018665.1-201ENST00000622927 1362 ntBASIC13.63□□□□□ -0.23
LTBQ06643 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.63□□□□□ -0.23
LTBQ06643 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.63□□□□□ -0.23
LTBQ06643 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LTBQ06643 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.63□□□□□ -0.23
LTBQ06643 EIF3FP3-201ENST00000434851 1086 ntBASIC13.63□□□□□ -0.23
LTBQ06643 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.63□□□□□ -0.23
LTBQ06643 GOLGA2P4-201ENST00000441462 777 ntBASIC13.63□□□□□ -0.23
LTBQ06643 AC114812.1-204ENST00000449669 728 ntBASIC13.63□□□□□ -0.23
LTBQ06643 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTBQ06643 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms