Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCR4P61073 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.6□□□□□ -0.23
CXCR4P61073 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.6□□□□□ -0.23
CXCR4P61073 AC092364.2-202ENST00000597012 1073 ntBASIC13.6□□□□□ -0.23
CXCR4P61073 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.6□□□□□ -0.23
CXCR4P61073 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
CXCR4P61073 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CXCR4P61073 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CXCR4P61073 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CXCR4P61073 RPL13P2-201ENST00000440687 659 ntBASIC13.59□□□□□ -0.23
CXCR4P61073 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCR4P61073 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.59□□□□□ -0.23
CXCR4P61073 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 LINC01115-203ENST00000606068 577 ntBASIC13.59□□□□□ -0.23
CXCR4P61073 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.59□□□□□ -0.23
CXCR4P61073 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 AL137783.1-201ENST00000623494 1896 ntBASIC13.59□□□□□ -0.23
CXCR4P61073 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
CXCR4P61073 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CXCR4P61073 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.58□□□□□ -0.23
CXCR4P61073 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CXCR4P61073 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.58□□□□□ -0.24
CXCR4P61073 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CXCR4P61073 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms