Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 SLC25A24P2-201ENST00000415059 510 ntBASIC17.09■□□□□ 0.33
CHMP4BP1P59074 FNTAP2-201ENST00000430308 634 ntBASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC004066.1-201ENST00000502488 802 ntBASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 ACTG1P17-201ENST00000558391 1119 ntBASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 EEF1DP1-201ENST00000585891 896 ntBASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP4BP1P59074 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP4BP1P59074 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 AC007787.1-201ENST00000588095 1583 ntBASIC17.08■□□□□ 0.32
CHMP4BP1P59074 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.08■□□□□ 0.32
CHMP4BP1P59074 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP4BP1P59074 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 AC015818.8-201ENST00000587907 1519 ntBASIC17.07■□□□□ 0.32
CHMP4BP1P59074 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.07■□□□□ 0.32
CHMP4BP1P59074 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP4BP1P59074 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms