Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB4P54760 AC234782.1-201ENST00000451950 919 ntBASIC16.77■□□□□ 0.28
EPHB4P54760 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.77■□□□□ 0.28
EPHB4P54760 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB4P54760 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.77■□□□□ 0.28
EPHB4P54760 RN7SL713P-201ENST00000582127 302 ntBASIC16.77■□□□□ 0.28
EPHB4P54760 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.77■□□□□ 0.28
EPHB4P54760 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.77■□□□□ 0.28
EPHB4P54760 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB4P54760 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.77■□□□□ 0.28
EPHB4P54760 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
EPHB4P54760 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EPHB4P54760 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.77■□□□□ 0.27
EPHB4P54760 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB4P54760 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB4P54760 AGAP7P-201ENST00000582299 2062 ntBASIC16.77■□□□□ 0.27
EPHB4P54760 AGAP14-201ENST00000624701 2060 ntBASIC16.77■□□□□ 0.27
EPHB4P54760 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
EPHB4P54760 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB4P54760 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.77■□□□□ 0.27
EPHB4P54760 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB4P54760 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.77■□□□□ 0.27
EPHB4P54760 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EPHB4P54760 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.77■□□□□ 0.27
EPHB4P54760 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
EPHB4P54760 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 AL354877.1-201ENST00000424412 413 ntBASIC16.76■□□□□ 0.27
EPHB4P54760 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 OR10B1P-201ENST00000601666 907 ntBASIC16.76■□□□□ 0.27
EPHB4P54760 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.76■□□□□ 0.27
EPHB4P54760 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EPHB4P54760 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
EPHB4P54760 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
EPHB4P54760 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
EPHB4P54760 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 CHMP1AP1-201ENST00000445563 662 ntBASIC16.75■□□□□ 0.27
EPHB4P54760 KRT18P66-201ENST00000452970 1269 ntBASIC16.75■□□□□ 0.27
EPHB4P54760 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.75■□□□□ 0.27
EPHB4P54760 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.75■□□□□ 0.27
EPHB4P54760 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms