Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.31□□□□□ -0.28
SRP9P49458 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.31□□□□□ -0.28
SRP9P49458 SERBP1P5-201ENST00000510079 1181 ntBASIC13.31□□□□□ -0.28
SRP9P49458 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.31□□□□□ -0.28
SRP9P49458 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.31□□□□□ -0.28
SRP9P49458 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.31□□□□□ -0.28
SRP9P49458 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.31□□□□□ -0.28
SRP9P49458 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.31□□□□□ -0.28
SRP9P49458 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.31□□□□□ -0.28
SRP9P49458 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SRP9P49458 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SRP9P49458 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 AC130686.1-201ENST00000622936 2466 ntBASIC13.31□□□□□ -0.28
SRP9P49458 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SRP9P49458 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SRP9P49458 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.3□□□□□ -0.28
SRP9P49458 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 AC236430.1-201ENST00000402231 743 ntBASIC13.3□□□□□ -0.28
SRP9P49458 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 AC087499.6-201ENST00000411576 835 ntBASIC13.3□□□□□ -0.28
SRP9P49458 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 AC002472.2-201ENST00000442739 958 ntBASIC13.3□□□□□ -0.28
SRP9P49458 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 AC055876.2-201ENST00000531834 546 ntBASIC13.3□□□□□ -0.28
SRP9P49458 AC036164.1-201ENST00000570544 333 ntBASIC13.3□□□□□ -0.28
SRP9P49458 RN7SL204P-201ENST00000582831 262 ntBASIC13.3□□□□□ -0.28
SRP9P49458 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.3□□□□□ -0.28
SRP9P49458 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SRP9P49458 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 AL391825.1-201ENST00000457671 1364 ntBASIC13.3□□□□□ -0.28
SRP9P49458 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SRP9P49458 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.3□□□□□ -0.28
SRP9P49458 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SRP9P49458 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.29□□□□□ -0.28
SRP9P49458 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SRP9P49458 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SRP9P49458 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.29□□□□□ -0.28
SRP9P49458 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SRP9P49458 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SRP9P49458 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms