Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.63□□□□□ -0.23
CENPAP49450 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.63□□□□□ -0.23
CENPAP49450 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.63□□□□□ -0.23
CENPAP49450 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 GRK6P1-201ENST00000400595 1711 ntBASIC13.63□□□□□ -0.23
CENPAP49450 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.63□□□□□ -0.23
CENPAP49450 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.63□□□□□ -0.23
CENPAP49450 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.63□□□□□ -0.23
CENPAP49450 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.63□□□□□ -0.23
CENPAP49450 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CENPAP49450 AC018529.2-202ENST00000611482 3087 ntBASIC13.62□□□□□ -0.23
CENPAP49450 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 BTBD7P1-201ENST00000447253 1453 ntBASIC13.62□□□□□ -0.23
CENPAP49450 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
CENPAP49450 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CENPAP49450 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.62□□□□□ -0.23
CENPAP49450 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.62□□□□□ -0.23
CENPAP49450 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 AC092337.1-201ENST00000568699 1129 ntBASIC13.62□□□□□ -0.23
CENPAP49450 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.62□□□□□ -0.23
CENPAP49450 AC093512.1-201ENST00000617969 520 ntBASIC13.62□□□□□ -0.23
CENPAP49450 AC139530.3-201ENST00000620344 690 ntBASIC13.62□□□□□ -0.23
CENPAP49450 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 LINC01230-201ENST00000625222 3017 ntBASIC13.62□□□□□ -0.23
CENPAP49450 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CENPAP49450 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.62□□□□□ -0.23
CENPAP49450 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CENPAP49450 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 MTHFR-210ENST00000641407 2387 ntBASIC13.61□□□□□ -0.23
CENPAP49450 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CENPAP49450 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.61□□□□□ -0.23
CENPAP49450 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CENPAP49450 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CENPAP49450 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms