Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
LHX1P48742 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LHX1P48742 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LHX1P48742 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LHX1P48742 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LHX1P48742 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LHX1P48742 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 KLF2P1-201ENST00000447438 1042 ntBASIC15.68■□□□□ 0.1
LHX1P48742 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
LHX1P48742 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.68■□□□□ 0.1
LHX1P48742 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 AC138649.2-201ENST00000615886 705 ntBASIC15.68■□□□□ 0.1
LHX1P48742 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 Z98259.2-201ENST00000641583 609 ntBASIC15.68■□□□□ 0.1
LHX1P48742 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
LHX1P48742 MYO15B-237ENST00000642007 4893 ntBASIC15.68■□□□□ 0.1
LHX1P48742 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.68■□□□□ 0.1
LHX1P48742 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 AC009093.10-201ENST00000641956 1442 ntBASIC15.68■□□□□ 0.1
LHX1P48742 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LHX1P48742 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LHX1P48742 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
LHX1P48742 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.67■□□□□ 0.1
LHX1P48742 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX1P48742 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.67■□□□□ 0.1
LHX1P48742 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 BX284668.4-201ENST00000453917 508 ntBASIC15.67■□□□□ 0.1
LHX1P48742 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.67■□□□□ 0.1
LHX1P48742 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX1P48742 RPL18P13-201ENST00000478088 569 ntBASIC15.67■□□□□ 0.1
LHX1P48742 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX1P48742 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.67■□□□□ 0.1
LHX1P48742 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.67■□□□□ 0.1
LHX1P48742 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.67■□□□□ 0.1
LHX1P48742 AC068587.8-201ENST00000641239 219 ntBASIC15.67■□□□□ 0.1
LHX1P48742 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LHX1P48742 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX1P48742 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LHX1P48742 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX1P48742 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX1P48742 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms