Protein–RNA interactions for Protein: P47898

HTR5A, 5-hydroxytryptamine receptor 5A, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR5AP47898 AC232323.1-201ENST00000540724 2099 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.17□□□□□ -0.3
HTR5AP47898 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 TDH-203ENST00000531764 1110 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 PTP4A1P2-201ENST00000546033 454 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 DUX4L47-201ENST00000566374 394 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 AC010319.3-201ENST00000597028 470 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 AC025048.6-201ENST00000634326 1161 ntBASIC13.17□□□□□ -0.3
HTR5AP47898 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.17□□□□□ -0.3
HTR5AP47898 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR5AP47898 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
HTR5AP47898 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR5AP47898 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HTR5AP47898 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 LINC00552-201ENST00000625151 2579 ntBASIC13.16□□□□□ -0.3
HTR5AP47898 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HTR5AP47898 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
HTR5AP47898 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.16□□□□□ -0.3
HTR5AP47898 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.16□□□□□ -0.3
HTR5AP47898 EIF3FP3-201ENST00000434851 1086 ntBASIC13.16□□□□□ -0.3
HTR5AP47898 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 AC026434.2-201ENST00000506094 1078 ntBASIC13.16□□□□□ -0.3
HTR5AP47898 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.16□□□□□ -0.3
HTR5AP47898 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
HTR5AP47898 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.16□□□□□ -0.3
HTR5AP47898 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HTR5AP47898 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HTR5AP47898 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms