Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNA4P43681 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA4P43681 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA4P43681 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRNA4P43681 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRNA4P43681 RN7SKP175-201ENST00000408472 289 ntBASIC15.01□□□□□ -0.01
CHRNA4P43681 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.01□□□□□ -0.01
CHRNA4P43681 CNN2P8-201ENST00000421872 913 ntBASIC15.01□□□□□ -0.01
CHRNA4P43681 U91328.1-201ENST00000437528 223 ntBASIC15.01□□□□□ -0.01
CHRNA4P43681 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA4P43681 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA4P43681 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA4P43681 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHRNA4P43681 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 MRPL37P1-201ENST00000592451 1337 ntBASIC15□□□□□ -0.01
CHRNA4P43681 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 GOLGA8DP-202ENST00000341390 2184 ntBASIC15□□□□□ -0.01
CHRNA4P43681 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 AC112492.5-201ENST00000421897 457 ntBASIC15□□□□□ -0.01
CHRNA4P43681 KRT43P-201ENST00000434019 910 ntBASIC15□□□□□ -0.01
CHRNA4P43681 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15□□□□□ -0.01
CHRNA4P43681 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15□□□□□ -0.01
CHRNA4P43681 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15□□□□□ -0.01
CHRNA4P43681 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA4P43681 AP000593.2-201ENST00000542775 1433 ntBASIC15□□□□□ -0.01
CHRNA4P43681 AC015802.1-201ENST00000588104 1449 ntBASIC15□□□□□ -0.01
CHRNA4P43681 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA4P43681 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA4P43681 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHRNA4P43681 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.99□□□□□ -0.01
CHRNA4P43681 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.99□□□□□ -0.01
CHRNA4P43681 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms