Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 CTBP2P8-201ENST00000422584 1330 ntBASIC18.07■□□□□ 0.48
TM4SF1P30408 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.07■□□□□ 0.48
TM4SF1P30408 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 AL162727.3-201ENST00000635661 2787 ntBASIC18.07■□□□□ 0.48
TM4SF1P30408 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF1P30408 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TM4SF1P30408 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF1P30408 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 GNG10P1-201ENST00000452289 199 ntBASIC18.07■□□□□ 0.48
TM4SF1P30408 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.07■□□□□ 0.48
TM4SF1P30408 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF1P30408 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.07■□□□□ 0.48
TM4SF1P30408 NDUFB10P1-201ENST00000567319 521 ntBASIC18.07■□□□□ 0.48
TM4SF1P30408 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF1P30408 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.07■□□□□ 0.48
TM4SF1P30408 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.07■□□□□ 0.48
TM4SF1P30408 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF1P30408 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF1P30408 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 ACTBP7-201ENST00000418351 1124 ntBASIC18.06■□□□□ 0.48
TM4SF1P30408 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC18.06■□□□□ 0.48
TM4SF1P30408 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF1P30408 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
TM4SF1P30408 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.06■□□□□ 0.48
TM4SF1P30408 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF1P30408 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF1P30408 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF1P30408 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TM4SF1P30408 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TM4SF1P30408 RNVU1-8-201ENST00000364272 125 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 MIR566-201ENST00000385187 94 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC18.05■□□□□ 0.48
TM4SF1P30408 AC098934.1-203ENST00000442868 1262 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.05■□□□□ 0.48
TM4SF1P30408 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.05■□□□□ 0.48
TM4SF1P30408 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TM4SF1P30408 AC006548.2-201ENST00000605217 529 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 AC018695.6-201ENST00000614011 534 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF1P30408 LINC00528-201ENST00000600723 2160 ntBASIC18.05■□□□□ 0.48
TM4SF1P30408 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.05■□□□□ 0.48
TM4SF1P30408 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms