Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.86■□□□□ 0.45
KCNA3P22001 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
KCNA3P22001 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KCNA3P22001 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.86■□□□□ 0.45
KCNA3P22001 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
KCNA3P22001 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.85■□□□□ 0.45
KCNA3P22001 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 BPIFB5P-201ENST00000457066 1099 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 AC090136.2-201ENST00000517809 420 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 IGHEP1-201ENST00000521393 651 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 AC068831.5-201ENST00000557387 328 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 AC013553.1-201ENST00000560906 267 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 TRMT112P3-201ENST00000580149 358 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.85■□□□□ 0.45
KCNA3P22001 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 NAV1-210ENST00000593583 726 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 AL118508.1-201ENST00000613502 2345 ntBASIC17.85■□□□□ 0.45
KCNA3P22001 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.85■□□□□ 0.45
KCNA3P22001 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
KCNA3P22001 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KCNA3P22001 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
KCNA3P22001 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KCNA3P22001 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNA3P22001 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KCNA3P22001 AL929302.1-201ENST00000426556 871 ntBASIC17.84■□□□□ 0.45
KCNA3P22001 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNA3P22001 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.84■□□□□ 0.45
KCNA3P22001 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.84■□□□□ 0.45
KCNA3P22001 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNA3P22001 AC008972.2-201ENST00000606587 494 ntBASIC17.84■□□□□ 0.45
KCNA3P22001 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 AGGF1P1-201ENST00000509500 2073 ntBASIC17.84■□□□□ 0.45
KCNA3P22001 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KCNA3P22001 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNA3P22001 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNA3P22001 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.83■□□□□ 0.45
KCNA3P22001 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNA3P22001 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNA3P22001 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNA3P22001 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KCNA3P22001 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
KCNA3P22001 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNA3P22001 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNA3P22001 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNA3P22001 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
KCNA3P22001 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNA3P22001 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNA3P22001 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNA3P22001 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNA3P22001 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms