Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.24■□□□□ 0.35
ATP2B1P20020 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATP2B1P20020 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.24■□□□□ 0.35
ATP2B1P20020 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATP2B1P20020 AL122018.1-201ENST00000446607 2310 ntBASIC17.24■□□□□ 0.35
ATP2B1P20020 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATP2B1P20020 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATP2B1P20020 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2B1P20020 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 BAATP1-201ENST00000412284 1225 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 ACTG1P3-201ENST00000431775 1114 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 AC022137.2-201ENST00000503482 481 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 PTP4A1P2-201ENST00000546033 454 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2B1P20020 DUX4L47-201ENST00000566374 394 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.23■□□□□ 0.35
ATP2B1P20020 AC012645.4-201ENST00000610691 1061 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 AC145423.3-201ENST00000615987 467 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 AC007292.2-201ENST00000593524 1812 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATP2B1P20020 AC026748.1-201ENST00000624349 3251 ntBASIC17.23■□□□□ 0.35
ATP2B1P20020 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.23■□□□□ 0.35
ATP2B1P20020 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.23■□□□□ 0.35
ATP2B1P20020 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.23■□□□□ 0.35
ATP2B1P20020 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2B1P20020 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ATP2B1P20020 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP2B1P20020 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
ATP2B1P20020 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 ACTBP8-201ENST00000403258 1108 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 TMEM14DP-201ENST00000422205 345 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 NME2P1-201ENST00000426182 414 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 FO681548.1-201ENST00000455617 1132 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 AC011495.1-201ENST00000498085 584 ntBASIC17.22■□□□□ 0.35
ATP2B1P20020 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.22■□□□□ 0.35
ATP2B1P20020 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
ATP2B1P20020 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.22■□□□□ 0.35
ATP2B1P20020 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.22■□□□□ 0.35
ATP2B1P20020 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATP2B1P20020 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms