Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
PRKCAP17252 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PRKCAP17252 AP006294.1-201ENST00000415407 339 ntBASIC13.89□□□□□ -0.19
PRKCAP17252 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 NUS1P3-201ENST00000423502 862 ntBASIC13.89□□□□□ -0.19
PRKCAP17252 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCAP17252 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCAP17252 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.89□□□□□ -0.19
PRKCAP17252 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.89□□□□□ -0.19
PRKCAP17252 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PRKCAP17252 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.89□□□□□ -0.19
PRKCAP17252 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRKCAP17252 AL360270.3-201ENST00000609118 1348 ntBASIC13.89□□□□□ -0.19
PRKCAP17252 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 AC098614.1-201ENST00000368528 745 ntBASIC13.88□□□□□ -0.19
PRKCAP17252 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PRKCAP17252 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.88□□□□□ -0.19
PRKCAP17252 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.88□□□□□ -0.19
PRKCAP17252 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.88□□□□□ -0.19
PRKCAP17252 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PRKCAP17252 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.88□□□□□ -0.19
PRKCAP17252 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 AC005252.2-201ENST00000624630 1141 ntBASIC13.88□□□□□ -0.19
PRKCAP17252 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
PRKCAP17252 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PRKCAP17252 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
PRKCAP17252 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRKCAP17252 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms