Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 AC055876.2-201ENST00000531834 546 ntBASIC14.75□□□□□ -0.05
COL6A2P12110 AC131206.1-201ENST00000538078 1211 ntBASIC14.75□□□□□ -0.05
COL6A2P12110 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
COL6A2P12110 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.75□□□□□ -0.05
COL6A2P12110 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
COL6A2P12110 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
COL6A2P12110 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
COL6A2P12110 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 SLC7A15P-201ENST00000424028 1363 ntBASIC14.74□□□□□ -0.05
COL6A2P12110 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 ACKR1-201ENST00000368121 1240 ntBASIC14.74□□□□□ -0.05
COL6A2P12110 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL6A2P12110 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL6A2P12110 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.74□□□□□ -0.05
COL6A2P12110 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.74□□□□□ -0.05
COL6A2P12110 METTL21AP1-201ENST00000438852 635 ntBASIC14.74□□□□□ -0.05
COL6A2P12110 AC092183.1-201ENST00000469884 875 ntBASIC14.74□□□□□ -0.05
COL6A2P12110 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.74□□□□□ -0.05
COL6A2P12110 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL6A2P12110 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
COL6A2P12110 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL6A2P12110 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.74□□□□□ -0.05
COL6A2P12110 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL6A2P12110 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 AC215219.1-201ENST00000400706 1817 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
COL6A2P12110 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 AC099521.3-201ENST00000624251 2938 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 AL138725.1-201ENST00000407347 1314 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.73□□□□□ -0.05
COL6A2P12110 LRRC59-203ENST00000576448 1531 ntBASIC14.73□□□□□ -0.05
COL6A2P12110 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL6A2P12110 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms