Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AL139094.1-201ENST00000405549 1188 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 HLA-K-203ENST00000430151 1046 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TSPY16P-201ENST00000449843 468 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AC022616.1-201ENST00000518688 554 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AC004790.1-201ENST00000612686 536 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AJ011932.1-201ENST00000621707 465 ntBASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H2ABP04908 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC005252.3-201ENST00000623855 2258 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC092552.1-201ENST00000547243 906 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 MIR8072-201ENST00000614241 80 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AC008761.3-201ENST00000624803 892 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 PRSS30P-206ENST00000641773 873 ntBASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HIST1H2ABP04908 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms