Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 AC140479.7-201ENST00000636301 2332 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
TRBV12-3P01733 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
TRBV12-3P01733 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.52□□□□□ -0.56
TRBV12-3P01733 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRBV12-3P01733 AL390755.1-201ENST00000623716 2027 ntBASIC11.52□□□□□ -0.56
TRBV12-3P01733 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 AC097359.2-201ENST00000604992 2389 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 AC007292.2-201ENST00000593524 1812 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 STX1A-203ENST00000395155 783 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 CSF2RBP1-201ENST00000447905 391 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 BNIP3P42-201ENST00000454982 569 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 MFF-223ENST00000524634 647 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 AP006547.1-201ENST00000563435 692 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 BNIP3P29-201ENST00000598302 571 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 AC073413.1-201ENST00000603927 732 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 AC011447.5-201ENST00000616168 564 ntBASIC11.52□□□□□ -0.57
TRBV12-3P01733 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.52□□□□□ -0.57
TRBV12-3P01733 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRBV12-3P01733 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TRBV12-3P01733 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TRBV12-3P01733 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms