Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.76■□□□□ 0.11
TIMP1P01033 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.76■□□□□ 0.11
TIMP1P01033 GOLGA2P7-209ENST00000560408 745 ntBASIC15.76■□□□□ 0.11
TIMP1P01033 AC140658.4-201ENST00000561990 352 ntBASIC15.76■□□□□ 0.11
TIMP1P01033 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 RPS5-204ENST00000598098 536 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.76■□□□□ 0.11
TIMP1P01033 HELLS-212ENST00000630929 400 ntTSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TIMP1P01033 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TIMP1P01033 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TIMP1P01033 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 AL357373.1-201ENST00000394974 322 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 MIR1301-201ENST00000408518 82 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.75■□□□□ 0.11
TIMP1P01033 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.75■□□□□ 0.11
TIMP1P01033 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC026470.1-201ENST00000478038 846 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.75■□□□□ 0.11
TIMP1P01033 AL133467.4-201ENST00000602953 725 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 AC090386.2-201ENST00000623010 1039 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 MME-218ENST00000625667 363 ntTSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 AGGF1P1-201ENST00000509500 2073 ntBASIC15.75■□□□□ 0.11
TIMP1P01033 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.75■□□□□ 0.11
TIMP1P01033 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TIMP1P01033 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TIMP1P01033 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TIMP1P01033 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TIMP1P01033 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 RN7SL767P-201ENST00000493013 295 ntBASIC15.74■□□□□ 0.11
TIMP1P01033 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.74■□□□□ 0.11
TIMP1P01033 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.74■□□□□ 0.11
TIMP1P01033 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 AC027139.1-201ENST00000565286 951 ntBASIC15.74■□□□□ 0.11
TIMP1P01033 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.74■□□□□ 0.11
TIMP1P01033 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TIMP1P01033 CYP4F36P-201ENST00000589193 186 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms