Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 CNN2P8-201ENST00000421872 913 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 AC016694.1-201ENST00000434179 700 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH4O75427 AC078819.1-201ENST00000547454 765 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 AC012085.1-201ENST00000548270 765 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 KRT90P-201ENST00000549264 1064 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 OR10B1P-201ENST00000601666 907 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH4O75427 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.46■□□□□ 0.06
LRCH4O75427 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.46■□□□□ 0.06
LRCH4O75427 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
LRCH4O75427 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRCH4O75427 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.46■□□□□ 0.06
LRCH4O75427 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
LRCH4O75427 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 KHSRPP1-201ENST00000427983 1768 ntBASIC15.45■□□□□ 0.06
LRCH4O75427 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.45■□□□□ 0.06
LRCH4O75427 CD8B2-202ENST00000417670 633 ntBASIC15.45■□□□□ 0.06
LRCH4O75427 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 AC007551.1-201ENST00000457394 519 ntBASIC15.45■□□□□ 0.06
LRCH4O75427 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 AC006453.4-201ENST00000636949 1252 ntBASIC15.45■□□□□ 0.06
LRCH4O75427 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 AL928921.2-201ENST00000641325 2442 ntBASIC15.45■□□□□ 0.06
LRCH4O75427 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.45■□□□□ 0.06
LRCH4O75427 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRCH4O75427 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRCH4O75427 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.44■□□□□ 0.06
LRCH4O75427 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 RN7SL832P-201ENST00000607781 1756 ntBASIC15.44■□□□□ 0.06
LRCH4O75427 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRCH4O75427 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LRCH4O75427 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRCH4O75427 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms