Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SLC33A1O00400 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 FAM86LP-201ENST00000478302 853 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC33A1O00400 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 AC004790.1-201ENST00000612686 536 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.84□□□□□ -0.35
SLC33A1O00400 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
SLC33A1O00400 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SLC33A1O00400 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC33A1O00400 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
SLC33A1O00400 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
SLC33A1O00400 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
SLC33A1O00400 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SLC33A1O00400 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SLC33A1O00400 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
SLC33A1O00400 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 LILRP1-201ENST00000444199 1370 ntBASIC12.83□□□□□ -0.36
SLC33A1O00400 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SLC33A1O00400 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.83□□□□□ -0.36
SLC33A1O00400 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SLC33A1O00400 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SLC33A1O00400 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SLC33A1O00400 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SLC33A1O00400 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 DOC2GP-202ENST00000514950 1163 ntBASIC12.83□□□□□ -0.36
SLC33A1O00400 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 TPRX2P-201ENST00000535362 881 ntBASIC12.83□□□□□ -0.36
SLC33A1O00400 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC005498.2-205ENST00000593218 784 ntBASIC12.83□□□□□ -0.36
SLC33A1O00400 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC33A1O00400 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC33A1O00400 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SLC33A1O00400 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 AC004899.2-201ENST00000622993 3860 ntBASIC12.83□□□□□ -0.36
SLC33A1O00400 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC33A1O00400 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC33A1O00400 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms