Protein–RNA interactions for Protein: J3KSC0

LINC01387, Putative uncharacterized protein encoded by LINC01387, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01387J3KSC0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 ALG3P1-201ENST00000508806 1114 ntBASIC13.53□□□□□ -0.24
LINC01387J3KSC0 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 OR10B1P-201ENST00000601666 907 ntBASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AC138696.2-201ENST00000607376 223 ntBASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01387J3KSC0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 AC117489.1-201ENST00000625169 3217 ntBASIC13.52□□□□□ -0.24
LINC01387J3KSC0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 MYO15B-237ENST00000642007 4893 ntBASIC13.52□□□□□ -0.24
LINC01387J3KSC0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01387J3KSC0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 CNN2P10-201ENST00000443067 918 ntBASIC13.52□□□□□ -0.25
LINC01387J3KSC0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AC008825.2-201ENST00000603374 718 ntBASIC13.52□□□□□ -0.25
LINC01387J3KSC0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AL138725.1-201ENST00000407347 1314 ntBASIC13.52□□□□□ -0.25
LINC01387J3KSC0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01387J3KSC0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms