Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PKP4P1-201ENST00000426801 2158 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL118505.1-201ENST00000619370 1932 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AP3S2-216ENST00000617003 1561 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC005332.1-201ENST00000577698 1310 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LINC00982-205ENST00000420957 435 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CHCHD2P8-201ENST00000429873 447 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NTM-206ENST00000427481 2583 ntTSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AGGF1P1-201ENST00000509500 2073 ntBASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NCF1C-201ENST00000438382 1427 ntBASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC246785.2-201ENST00000432512 513 ntBASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC003958.1-201ENST00000435883 421 ntBASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AL353801.3-201ENST00000609898 542 ntBASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BOLA2-SMG1P6H3BVE0 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms