Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC108724.1-201ENST00000481669 352 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC090820.1-201ENST00000519722 591 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC078814.4-201ENST00000546650 327 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC120498.7-201ENST00000562876 330 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AC091304.3-201ENST00000566500 716 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 CSTP2-201ENST00000610599 398 ntBASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM88BA6NKF7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 OR10N1P-201ENST00000392758 869 ntBASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AC136604.1-202ENST00000425471 771 ntBASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 AC005274.1-201ENST00000623460 802 ntBASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88BA6NKF7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AC009090.5-201ENST00000624886 2285 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AL662844.4-201ENST00000606367 2838 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms