Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC113367.3-201ENST00000508316 1912 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC092933.1-201ENST00000393644 945 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC104457.1-201ENST00000401024 814 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC119751.2-201ENST00000504529 210 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC079316.1-201ENST00000548397 411 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RN7SL219P-201ENST00000582872 296 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BX539320.1-201ENST00000623759 877 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC007787.1-201ENST00000588095 1583 ntBASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.04□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL138799.1-201ENST00000448213 1675 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC018442.1-201ENST00000421439 2061 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BRWD1P1-201ENST00000401091 371 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC092658.1-201ENST00000505836 891 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AC025181.2-201ENST00000606994 802 ntBASIC12.03□□□□□ -0.48
TCRBV4S1A1TA0A5B7 AP005019.2-201ENST00000615104 511 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms