Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC006001.1-201ENST00000325130 474 ntBASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ACTG1P17-201ENST00000558391 1119 ntBASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC005695.3-201ENST00000614522 232 ntBASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AL008638.5-201ENST00000623814 1298 ntBASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHB1Q9Y5F3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 BTBD6P1-201ENST00000412176 1267 ntBASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 TLE1P1-201ENST00000422965 589 ntBASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 AL590640.2-201ENST00000457038 527 ntBASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 MTHFR-210ENST00000641407 2387 ntBASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHB1Q9Y5F3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHB1Q9Y5F3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms