Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
SYNPO2Q9UMS6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AL161932.2-201ENST00000435436 679 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AL133499.1-201ENST00000596207 608 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 AC104506.1-201ENST00000609247 429 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LINC01783-202ENST00000614408 828 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 BX284668.2-205ENST00000619677 828 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 FGD5P1-202ENST00000614866 2498 ntBASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SYNPO2Q9UMS6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 TPT1P11-201ENST00000458482 498 ntBASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC012044.1-201ENST00000603431 297 ntBASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AC021016.3-201ENST00000608367 477 ntBASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 AL022334.2-201ENST00000610000 484 ntBASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SYNPO2Q9UMS6 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms