Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FAM213AP2-201ENST00000521579 683 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 AC015818.3-201ENST00000583797 589 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 AC064850.1-201ENST00000413279 1398 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 POLR3DP1-201ENST00000398689 1176 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 MPV17-209ENST00000405983 859 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 MEP1AP1-201ENST00000636082 1097 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 MECP2-226ENST00000640414 897 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC007613.1-201ENST00000572811 2597 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 LINC02447-202ENST00000501888 2146 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 LAP3P2-201ENST00000454686 1454 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 SALL4P6-201ENST00000429385 1691 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 RN7SL487P-201ENST00000468140 344 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 SRPK2P-201ENST00000523408 1100 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AL353708.1-201ENST00000567904 1257 ntBASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RIMBP3Q9UFD9 AP001094.4-201ENST00000579008 2176 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 MIR766-201ENST00000390223 111 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 Z84721.1-201ENST00000438841 372 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 GULOP-201ENST00000454030 748 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 AL133551.1-201ENST00000610279 1222 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 AL158032.2-201ENST00000616818 195 ntBASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RIMBP3Q9UFD9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
RIMBP3Q9UFD9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC22.52■■□□□ 1.19
RIMBP3Q9UFD9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 AL031673.1-201ENST00000611460 466 ntBASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RIMBP3Q9UFD9 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms