Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC079178.1-201ENST00000420915 656 ntBASIC14.9□□□□□ -0.02
SPASTQ9UBP0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC005695.3-201ENST00000614522 232 ntBASIC14.9□□□□□ -0.02
SPASTQ9UBP0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC126365.1-201ENST00000578585 1514 ntBASIC14.9□□□□□ -0.02
SPASTQ9UBP0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC091951.1-201ENST00000512854 2465 ntBASIC14.9□□□□□ -0.02
SPASTQ9UBP0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SPASTQ9UBP0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.89□□□□□ -0.03
SPASTQ9UBP0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.89□□□□□ -0.03
SPASTQ9UBP0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
SPASTQ9UBP0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.88□□□□□ -0.03
SPASTQ9UBP0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 ST20-AS1-201ENST00000560255 4223 ntBASIC14.88□□□□□ -0.03
SPASTQ9UBP0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 AC104457.1-201ENST00000401024 814 ntBASIC14.88□□□□□ -0.03
SPASTQ9UBP0 POM121L8P-201ENST00000417732 1281 ntBASIC14.88□□□□□ -0.03
SPASTQ9UBP0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.88□□□□□ -0.03
SPASTQ9UBP0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms