Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SP110Q9HB58 AC106881.1-201ENST00000605849 3329 ntBASIC15.3■□□□□ 0.04
SP110Q9HB58 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SP110Q9HB58 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SP110Q9HB58 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SP110Q9HB58 MTHFR-210ENST00000641407 2387 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 AC011840.2-201ENST00000563063 1520 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SP110Q9HB58 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AL138725.1-201ENST00000407347 1314 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.29■□□□□ 0.04
SP110Q9HB58 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.29■□□□□ 0.04
SP110Q9HB58 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AP000812.2-201ENST00000538934 718 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AC138696.2-201ENST00000607376 223 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.29■□□□□ 0.04
SP110Q9HB58 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.29■□□□□ 0.04
SP110Q9HB58 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SP110Q9HB58 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.29■□□□□ 0.04
SP110Q9HB58 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.28■□□□□ 0.04
SP110Q9HB58 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.28■□□□□ 0.04
SP110Q9HB58 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
SP110Q9HB58 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 AC006001.1-201ENST00000325130 474 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 MIR1202-201ENST00000408529 83 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 MIR1909-201ENST00000411312 80 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 CD8B2-202ENST00000417670 633 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.28■□□□□ 0.04
SP110Q9HB58 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.28■□□□□ 0.04
SP110Q9HB58 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 AL391280.1-201ENST00000506969 1062 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 IGHV3-71-201ENST00000523324 359 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 AC079316.1-201ENST00000548397 411 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 AC106820.3-201ENST00000561653 397 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 AC017083.2-201ENST00000608069 979 ntBASIC15.28■□□□□ 0.04
SP110Q9HB58 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SP110Q9HB58 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.28■□□□□ 0.04
SP110Q9HB58 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SP110Q9HB58 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.28■□□□□ 0.04
SP110Q9HB58 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.28■□□□□ 0.04
SP110Q9HB58 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.28■□□□□ 0.04
SP110Q9HB58 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SP110Q9HB58 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms