Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 HLA-K-203ENST00000430151 1046 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC114501.2-201ENST00000439631 535 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 TMEM198B-204ENST00000484016 896 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC092337.1-201ENST00000568699 1129 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC008738.7-201ENST00000609744 511 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC009118.2-201ENST00000613275 655 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 5S_rRNA.22-201ENST00000614916 106 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AL158212.4-201ENST00000624062 1286 ntBASIC14□□□□□ -0.17
AMBRA1Q9C0C7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AMBRA1Q9C0C7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 AC090505.1-201ENST00000430515 1834 ntBASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 AL365209.1-201ENST00000624418 6473 ntBASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 MIR661-201ENST00000384842 89 ntBASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 TSPY16P-201ENST00000449843 468 ntBASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 INE2-201ENST00000630399 1874 ntBASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AMBRA1Q9C0C7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms