Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 INTS4P2-202ENST00000614726 2019 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 MIR6799-201ENST00000620297 69 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 AC023024.2-201ENST00000623561 1993 ntBASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF4Q9BUZ4 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 OR2I1P-209ENST00000641730 5365 ntBASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 SOCS2P1-201ENST00000417727 557 ntBASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC124283.3-201ENST00000570869 594 ntBASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 AL049840.4-201ENST00000602422 811 ntBASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAF4Q9BUZ4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 ANKRD19P-201ENST00000338192 862 ntBASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAF4Q9BUZ4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms