Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CLCC1Q96S66 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.69□□□□□ -0.38
CLCC1Q96S66 AL035456.1-201ENST00000456064 1369 ntBASIC12.69□□□□□ -0.38
CLCC1Q96S66 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLCC1Q96S66 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 HLA-J-203ENST00000494367 1087 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 AC093028.1-201ENST00000622998 982 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 CETN4P-206ENST00000642099 2168 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 INTS4P1-203ENST00000641008 3683 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.68□□□□□ -0.38
CLCC1Q96S66 WASH3P-207ENST00000560956 1394 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 FO538757.1-201ENST00000623083 1397 ntBASIC12.68□□□□□ -0.38
CLCC1Q96S66 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLCC1Q96S66 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TUBB3P1-201ENST00000405796 1332 ntBASIC12.67□□□□□ -0.38
CLCC1Q96S66 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 AL133215.2-201ENST00000609242 977 ntBASIC12.67□□□□□ -0.38
CLCC1Q96S66 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CLCC1Q96S66 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLCC1Q96S66 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms