Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
USP9XQ93008 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.72□□□□□ -0.37
USP9XQ93008 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.72□□□□□ -0.37
USP9XQ93008 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 AL035414.1-201ENST00000451327 857 ntBASIC12.72□□□□□ -0.37
USP9XQ93008 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.72□□□□□ -0.37
USP9XQ93008 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.72□□□□□ -0.37
USP9XQ93008 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
USP9XQ93008 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.71□□□□□ -0.37
USP9XQ93008 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 AL596087.1-201ENST00000400979 1969 ntBASIC12.71□□□□□ -0.37
USP9XQ93008 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
USP9XQ93008 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
USP9XQ93008 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 AC092570.1-201ENST00000414446 469 ntBASIC12.71□□□□□ -0.37
USP9XQ93008 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.71□□□□□ -0.37
USP9XQ93008 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
USP9XQ93008 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.71□□□□□ -0.37
USP9XQ93008 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
USP9XQ93008 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
USP9XQ93008 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.71□□□□□ -0.37
USP9XQ93008 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.71□□□□□ -0.38
USP9XQ93008 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.71□□□□□ -0.38
USP9XQ93008 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.71□□□□□ -0.38
USP9XQ93008 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.71□□□□□ -0.38
USP9XQ93008 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.71□□□□□ -0.38
USP9XQ93008 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.71□□□□□ -0.38
USP9XQ93008 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.71□□□□□ -0.38
USP9XQ93008 AC104961.1-201ENST00000427605 771 ntBASIC12.71□□□□□ -0.38
USP9XQ93008 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.71□□□□□ -0.38
USP9XQ93008 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.71□□□□□ -0.38
USP9XQ93008 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 FBXO36P1-201ENST00000579006 471 ntBASIC12.71□□□□□ -0.38
USP9XQ93008 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.71□□□□□ -0.38
USP9XQ93008 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.71□□□□□ -0.38
USP9XQ93008 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
USP9XQ93008 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 FUCA1P1-201ENST00000374476 1351 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
USP9XQ93008 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 SALL4P5-201ENST00000419001 1760 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.7□□□□□ -0.38
USP9XQ93008 RPL5P21-201ENST00000404620 815 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 AL512599.1-201ENST00000430724 685 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 IGHEP2-201ENST00000519308 1256 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 AC131206.1-201ENST00000538078 1211 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.7□□□□□ -0.38
USP9XQ93008 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.7□□□□□ -0.38
USP9XQ93008 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
USP9XQ93008 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms