Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.15□□□□□ -0.14
TM9SF4Q92544 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 PCDHA3-202ENST00000532566 4594 ntBASIC14.15□□□□□ -0.14
TM9SF4Q92544 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TM9SF4Q92544 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.15□□□□□ -0.14
TM9SF4Q92544 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
TM9SF4Q92544 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC140479.7-201ENST00000636301 2332 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 MIR1202-201ENST00000408529 83 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 GOLGA2P4-201ENST00000441462 777 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 HOMER2P2-201ENST00000451621 847 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC104306.2-201ENST00000451877 341 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC015818.8-201ENST00000587907 1519 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
TM9SF4Q92544 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 AC005840.4-201ENST00000541242 2494 ntBASIC14.14□□□□□ -0.15
TM9SF4Q92544 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TM9SF4Q92544 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TM9SF4Q92544 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.13□□□□□ -0.15
TM9SF4Q92544 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms