Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PCDHA1-201ENST00000378133 2726 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AL773545.2-201ENST00000442149 472 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 RN7SL578P-201ENST00000477781 283 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC008494.1-201ENST00000497612 796 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 SNORD3B-1-201ENST00000577988 758 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC064801.2-201ENST00000625052 1303 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 MIR4265-201ENST00000582152 99 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 FAU-201ENST00000279259 461 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC133141.1-201ENST00000443015 339 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 EEF1DP7-201ENST00000580496 513 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 TYMSP2-201ENST00000589501 424 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AL031673.1-201ENST00000611460 466 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 AC126755.5-201ENST00000622756 267 ntBASIC9.67□□□□□ -0.86
ALMS1Q8TCU4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 U73169.1-201ENST00000395152 367 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 STK24P1-201ENST00000455035 1291 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 TPT1P6-201ENST00000458298 514 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC079414.2-201ENST00000567157 1104 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC005746.3-201ENST00000614751 393 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AL357143.1-203ENST00000639750 881 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 GPX3-202ENST00000517973 612 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 AC092850.2-201ENST00000623821 2697 ntBASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
ALMS1Q8TCU4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms