Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AL138725.1-201ENST00000407347 1314 ntBASIC13.97□□□□□ -0.17
NUP43Q8NFH3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AL355864.2-201ENST00000447420 863 ntBASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 RN7SL837P-201ENST00000463010 287 ntBASIC13.97□□□□□ -0.17
NUP43Q8NFH3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ENPP7P14-201ENST00000621765 1040 ntBASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NUP43Q8NFH3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 AL136172.1-201ENST00000598590 1394 ntBASIC13.96□□□□□ -0.17
NUP43Q8NFH3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 MESTP3-201ENST00000503460 968 ntBASIC13.96□□□□□ -0.17
NUP43Q8NFH3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NUP43Q8NFH3 AC092135.3-201ENST00000624151 1846 ntBASIC13.96□□□□□ -0.17
NUP43Q8NFH3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
NUP43Q8NFH3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms