Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 POM121L9P-203ENST00000441984 1285 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 GPR53P-205ENST00000457298 1084 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 FTH1P14-201ENST00000482930 551 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 RN7SL48P-201ENST00000579283 293 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CPEB3Q8NE35 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CPEB3Q8NE35 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CPEB3Q8NE35 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 LINC00552-201ENST00000625151 2579 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 BOLA2P3-201ENST00000404566 256 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC016694.1-201ENST00000434179 700 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC245100.3-201ENST00000441281 285 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC106886.1-201ENST00000568660 600 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 AC244669.2-201ENST00000612320 853 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CLUHP2-201ENST00000426660 1303 ntBASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CPEB3Q8NE35 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CPEB3Q8NE35 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms