Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 ACTBP8-201ENST00000403258 1108 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AL512384.1-201ENST00000406683 331 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 BAATP1-201ENST00000412284 1225 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC012441.1-201ENST00000446669 685 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC008735.3-201ENST00000596646 500 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC097359.2-201ENST00000604992 2389 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 KRT8P35-201ENST00000483942 1338 ntBASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
SIMC1Q8NDZ2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 INTS4P1-203ENST00000641008 3683 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 USP32P1-208ENST00000506594 1164 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AP001889.1-201ENST00000525414 633 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AC068587.3-201ENST00000526613 355 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AC145423.3-201ENST00000615987 467 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 CU639417.3-201ENST00000624240 1404 ntBASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.11□□□□□ -0.15
SIMC1Q8NDZ2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 LRRC59-203ENST00000576448 1531 ntBASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SIMC1Q8NDZ2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms