Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 AL391825.1-201ENST00000457671 1364 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 AC087499.6-201ENST00000411576 835 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 ELK1P1-201ENST00000485699 580 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 AC022447.6-201ENST00000515522 438 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 WASH4P-201ENST00000564273 1246 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 DUX4L47-201ENST00000566374 394 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TMEM261P1-201ENST00000604899 340 ntBASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
LINC00346Q8IVM7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC236430.1-201ENST00000402231 743 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 EIF3FP3-201ENST00000434851 1086 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 BCRP1-201ENST00000444246 691 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC114812.1-204ENST00000449669 728 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 CTBP2P3-201ENST00000585629 1255 ntBASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
LINC00346Q8IVM7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms