Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 AC023310.1-201ENST00000554836 735 ntBASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 AC138466.3-201ENST00000619983 221 ntBASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 COX11-210ENST00000639671 696 ntBASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NUP54Q7Z3B4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 MIR658-201ENST00000385210 100 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 TLE1P1-201ENST00000422965 589 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SNX29P1-201ENST00000548357 1007 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AC004466.1-201ENST00000599515 1080 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AL359881.2-201ENST00000602973 570 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ECM1P1-201ENST00000604092 1279 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AC232323.1-201ENST00000540724 2099 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 CLUHP2-201ENST00000426660 1303 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AHCYP2-201ENST00000430630 1300 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NUP54Q7Z3B4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP54Q7Z3B4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.81□□□□□ -0.2
NUP54Q7Z3B4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NUP54Q7Z3B4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms