Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL603764.1-201ENST00000636452 321 ntBASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RFWD3Q6PCD5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AL391280.1-201ENST00000506969 1062 ntBASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 MIR4741-201ENST00000579822 90 ntBASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 OR10B1P-201ENST00000601666 907 ntBASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 AC010327.5-201ENST00000586923 3061 ntBASIC15.57■□□□□ 0.08
RFWD3Q6PCD5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 AC140479.7-201ENST00000636301 2332 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 AC006504.5-208ENST00000588784 2401 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 RPL13AP20-201ENST00000459725 609 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 AP003171.2-201ENST00000528208 925 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 DUX4L45-201ENST00000566406 1057 ntBASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFWD3Q6PCD5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms