Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AC139749.1-202ENST00000617529 3139 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 AL136172.1-201ENST00000598590 1394 ntBASIC17.81■□□□□ 0.44
RNF20Q5VTR2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 CLUHP2-201ENST00000426660 1303 ntBASIC17.81■□□□□ 0.44
RNF20Q5VTR2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 AC132938.4-201ENST00000623835 848 ntBASIC17.81■□□□□ 0.44
RNF20Q5VTR2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF20Q5VTR2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 MRPL37P1-201ENST00000592451 1337 ntBASIC17.8■□□□□ 0.44
RNF20Q5VTR2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 FTLP10-202ENST00000505798 471 ntBASIC17.8■□□□□ 0.44
RNF20Q5VTR2 AC106760.1-201ENST00000508690 800 ntBASIC17.8■□□□□ 0.44
RNF20Q5VTR2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 AC138696.2-201ENST00000607376 223 ntBASIC17.8■□□□□ 0.44
RNF20Q5VTR2 AC138466.3-201ENST00000619983 221 ntBASIC17.8■□□□□ 0.44
RNF20Q5VTR2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF20Q5VTR2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF20Q5VTR2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF20Q5VTR2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF20Q5VTR2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms