Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 AC152010.1-201ENST00000415779 2006 ntBASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CBWD3Q5JTY5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC006001.1-201ENST00000325130 474 ntBASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC004945.1-201ENST00000416738 983 ntBASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 CD8B2-202ENST00000417670 633 ntBASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ARSEP1-201ENST00000420443 635 ntBASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC073413.1-201ENST00000603927 732 ntBASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBWD3Q5JTY5 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 PDIA3P1-201ENST00000471856 1510 ntBASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 AC103988.2-201ENST00000561804 725 ntBASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBWD3Q5JTY5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms