Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ANKRD55Q3KP44 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 AL122018.1-201ENST00000446607 2310 ntBASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 AC111170.3-201ENST00000624282 2464 ntBASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 AC074044.1-201ENST00000609673 707 ntBASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ANKRD55Q3KP44 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC005237.2-201ENST00000434368 219 ntBASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 DNAJB3-202ENST00000449667 1266 ntBASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 KRT18P43-201ENST00000469825 1281 ntBASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC069335.1-201ENST00000489972 472 ntBASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.43□□□□□ -0.42
ANKRD55Q3KP44 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms