Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO4Q2I0M5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AL512306.1-201ENST00000432698 848 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 DUX4L50-201ENST00000455245 715 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC068867.1-201ENST00000559855 150 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC006449.6-201ENST00000612330 2296 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC007950.2-201ENST00000615045 2347 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 AC110057.1-201ENST00000636031 898 ntBASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO4Q2I0M5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RSPO4Q2I0M5 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC046158.3-201ENST00000624947 2558 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AL929302.1-201ENST00000426556 871 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 XBP1P1-201ENST00000436573 652 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 RPL3P5-201ENST00000441645 1232 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC006529.1-201ENST00000459978 637 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AC027601.3-201ENST00000622907 509 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 CR392039.1-201ENST00000623217 204 ntBASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO4Q2I0M5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms