Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IRX4P78413 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
IRX4P78413 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IRX4P78413 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
IRX4P78413 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 C1QBPP1-201ENST00000400117 770 ntBASIC15.62■□□□□ 0.09
IRX4P78413 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.62■□□□□ 0.09
IRX4P78413 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.62■□□□□ 0.09
IRX4P78413 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 RPL13AP25-201ENST00000484130 612 ntBASIC15.62■□□□□ 0.09
IRX4P78413 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.62■□□□□ 0.09
IRX4P78413 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.62■□□□□ 0.09
IRX4P78413 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.62■□□□□ 0.09
IRX4P78413 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.62■□□□□ 0.09
IRX4P78413 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
IRX4P78413 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.62■□□□□ 0.09
IRX4P78413 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.62■□□□□ 0.09
IRX4P78413 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IRX4P78413 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 AC104581.4-201ENST00000623126 3052 ntBASIC15.61■□□□□ 0.09
IRX4P78413 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.61■□□□□ 0.09
IRX4P78413 AC006033.1-201ENST00000440505 426 ntBASIC15.61■□□□□ 0.09
IRX4P78413 AC012441.1-201ENST00000446669 685 ntBASIC15.61■□□□□ 0.09
IRX4P78413 AC093433.1-201ENST00000458048 571 ntBASIC15.61■□□□□ 0.09
IRX4P78413 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.61■□□□□ 0.09
IRX4P78413 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.61■□□□□ 0.09
IRX4P78413 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.61■□□□□ 0.09
IRX4P78413 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.61■□□□□ 0.09
IRX4P78413 AC120045.2-201ENST00000567334 178 ntBASIC15.61■□□□□ 0.09
IRX4P78413 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.61■□□□□ 0.09
IRX4P78413 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
IRX4P78413 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
IRX4P78413 RHOXF1P1-202ENST00000635473 501 ntBASIC15.61■□□□□ 0.09
IRX4P78413 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms