Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 TPM3P8-201ENST00000330554 643 ntBASIC14.09□□□□□ -0.15
RAE1P78406 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
RAE1P78406 BCRP2-202ENST00000447763 634 ntBASIC14.09□□□□□ -0.15
RAE1P78406 INE1-201ENST00000456273 945 ntBASIC14.09□□□□□ -0.15
RAE1P78406 RN7SL692P-201ENST00000464677 288 ntBASIC14.09□□□□□ -0.15
RAE1P78406 ALG3P1-201ENST00000508806 1114 ntBASIC14.09□□□□□ -0.15
RAE1P78406 BCRP6-201ENST00000510112 632 ntBASIC14.09□□□□□ -0.15
RAE1P78406 BCRP7-201ENST00000511549 544 ntBASIC14.09□□□□□ -0.15
RAE1P78406 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.09□□□□□ -0.15
RAE1P78406 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.09□□□□□ -0.15
RAE1P78406 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.09□□□□□ -0.15
RAE1P78406 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 AC132938.2-201ENST00000579188 680 ntBASIC14.09□□□□□ -0.15
RAE1P78406 MIR6074-201ENST00000612054 107 ntBASIC14.09□□□□□ -0.15
RAE1P78406 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.09□□□□□ -0.15
RAE1P78406 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.09□□□□□ -0.15
RAE1P78406 AL591163.1-201ENST00000641757 987 ntBASIC14.09□□□□□ -0.15
RAE1P78406 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 AC020910.6-201ENST00000623084 1459 ntBASIC14.09□□□□□ -0.15
RAE1P78406 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
RAE1P78406 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.09□□□□□ -0.15
RAE1P78406 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RAE1P78406 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAE1P78406 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
RAE1P78406 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAE1P78406 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.08□□□□□ -0.15
RAE1P78406 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAE1P78406 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RAE1P78406 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.08□□□□□ -0.16
RAE1P78406 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.08□□□□□ -0.16
RAE1P78406 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAE1P78406 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
RAE1P78406 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.08□□□□□ -0.16
RAE1P78406 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.08□□□□□ -0.16
RAE1P78406 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 AC011495.1-201ENST00000498085 584 ntBASIC14.08□□□□□ -0.16
RAE1P78406 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 AL596325.1-201ENST00000563991 1082 ntBASIC14.08□□□□□ -0.16
RAE1P78406 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.08□□□□□ -0.16
RAE1P78406 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAE1P78406 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RAE1P78406 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.08□□□□□ -0.16
RAE1P78406 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms