Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ASIC1P78348 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ASIC1P78348 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ASIC1P78348 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ASIC1P78348 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ASIC1P78348 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 LINC01230-201ENST00000625222 3017 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 AC245100.3-201ENST00000441281 285 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.66■□□□□ 0.26
ASIC1P78348 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 RN7SL692P-201ENST00000464677 288 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.66■□□□□ 0.26
ASIC1P78348 AC011495.1-201ENST00000498085 584 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.66■□□□□ 0.26
ASIC1P78348 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ASIC1P78348 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ASIC1P78348 AC015802.1-201ENST00000588104 1449 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.66■□□□□ 0.26
ASIC1P78348 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.66■□□□□ 0.26
ASIC1P78348 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ASIC1P78348 ST20-AS1-201ENST00000560255 4223 ntBASIC16.66■□□□□ 0.26
ASIC1P78348 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
ASIC1P78348 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ASIC1P78348 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.65■□□□□ 0.26
ASIC1P78348 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.65■□□□□ 0.26
ASIC1P78348 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ASIC1P78348 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.65■□□□□ 0.26
ASIC1P78348 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ASIC1P78348 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ASIC1P78348 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ASIC1P78348 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ASIC1P78348 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ASIC1P78348 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ASIC1P78348 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ASIC1P78348 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.64■□□□□ 0.26
ASIC1P78348 AL136172.1-201ENST00000598590 1394 ntBASIC16.64■□□□□ 0.26
ASIC1P78348 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.64■□□□□ 0.26
ASIC1P78348 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ASIC1P78348 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.64■□□□□ 0.25
ASIC1P78348 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.64■□□□□ 0.25
ASIC1P78348 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ASIC1P78348 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.64■□□□□ 0.25
ASIC1P78348 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.64■□□□□ 0.25
ASIC1P78348 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ASIC1P78348 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms