Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
YBX1P67809 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
YBX1P67809 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.53□□□□□ -0.08
YBX1P67809 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 FER1L4-210ENST00000615531 5998 ntBASIC14.53□□□□□ -0.08
YBX1P67809 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.52□□□□□ -0.08
YBX1P67809 AC020910.5-201ENST00000623668 1865 ntBASIC14.52□□□□□ -0.08
YBX1P67809 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.52□□□□□ -0.08
YBX1P67809 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
YBX1P67809 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
YBX1P67809 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
YBX1P67809 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
YBX1P67809 AC015802.1-201ENST00000588104 1449 ntBASIC14.52□□□□□ -0.08
YBX1P67809 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.52□□□□□ -0.08
YBX1P67809 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.52□□□□□ -0.08
YBX1P67809 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
YBX1P67809 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.52□□□□□ -0.08
YBX1P67809 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 CNN2P8-201ENST00000421872 913 ntBASIC14.52□□□□□ -0.09
YBX1P67809 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
YBX1P67809 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.52□□□□□ -0.09
YBX1P67809 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.52□□□□□ -0.09
YBX1P67809 AC022210.1-201ENST00000449856 793 ntBASIC14.52□□□□□ -0.09
YBX1P67809 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.52□□□□□ -0.09
YBX1P67809 AP003171.2-201ENST00000528208 925 ntBASIC14.52□□□□□ -0.09
YBX1P67809 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
YBX1P67809 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.52□□□□□ -0.09
YBX1P67809 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.52□□□□□ -0.09
YBX1P67809 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.52□□□□□ -0.09
YBX1P67809 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.52□□□□□ -0.09
YBX1P67809 ENPP7P14-201ENST00000621765 1040 ntBASIC14.52□□□□□ -0.09
YBX1P67809 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.52□□□□□ -0.09
YBX1P67809 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.52□□□□□ -0.09
YBX1P67809 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
YBX1P67809 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
YBX1P67809 NORAD-201ENST00000565493 5339 ntBASIC14.51□□□□□ -0.09
YBX1P67809 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 AC092135.3-201ENST00000624151 1846 ntBASIC14.51□□□□□ -0.09
YBX1P67809 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 OR8S1-201ENST00000310194 1080 ntBASIC14.51□□□□□ -0.09
YBX1P67809 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
YBX1P67809 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.51□□□□□ -0.09
YBX1P67809 AC026954.1-201ENST00000429771 1293 ntBASIC14.51□□□□□ -0.09
YBX1P67809 KRT43P-201ENST00000434019 910 ntBASIC14.51□□□□□ -0.09
YBX1P67809 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
YBX1P67809 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
YBX1P67809 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 IGHV3-71-201ENST00000523324 359 ntBASIC14.51□□□□□ -0.09
YBX1P67809 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.51□□□□□ -0.09
YBX1P67809 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
YBX1P67809 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.51□□□□□ -0.09
YBX1P67809 AC132938.4-201ENST00000623835 848 ntBASIC14.51□□□□□ -0.09
YBX1P67809 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.51□□□□□ -0.09
YBX1P67809 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms