Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB1AP62820 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 TPM3P8-201ENST00000330554 643 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 FO681548.1-201ENST00000455617 1132 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RAB1AP62820 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RAB1AP62820 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 RAB43P1-201ENST00000561790 589 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 GNRHR2-203ENST00000581100 1187 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 AC023090.2-201ENST00000625182 2110 ntBASIC13.17□□□□□ -0.3
RAB1AP62820 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RAB1AP62820 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
RAB1AP62820 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RAB1AP62820 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RAB1AP62820 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB1AP62820 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
RAB1AP62820 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB1AP62820 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RAB1AP62820 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB1AP62820 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 AC112492.5-201ENST00000421897 457 ntBASIC13.16□□□□□ -0.3
RAB1AP62820 AC245100.3-201ENST00000441281 285 ntBASIC13.16□□□□□ -0.3
RAB1AP62820 AC234783.1-201ENST00000441761 496 ntBASIC13.16□□□□□ -0.3
RAB1AP62820 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB1AP62820 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.16□□□□□ -0.3
RAB1AP62820 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB1AP62820 AC239800.4-201ENST00000603712 296 ntBASIC13.16□□□□□ -0.3
RAB1AP62820 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB1AP62820 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 ENPP7P14-201ENST00000621765 1040 ntBASIC13.16□□□□□ -0.3
RAB1AP62820 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RAB1AP62820 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAB1AP62820 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RAB1AP62820 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB1AP62820 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms