Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 TIMM17BP1-201ENST00000545713 516 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 HNRNPUP1-201ENST00000554987 333 ntBASIC13.17□□□□□ -0.3
SEC61A1P61619 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.17□□□□□ -0.3
SEC61A1P61619 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.17□□□□□ -0.3
SEC61A1P61619 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SEC61A1P61619 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SEC61A1P61619 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SEC61A1P61619 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
SEC61A1P61619 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.16□□□□□ -0.3
SEC61A1P61619 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.16□□□□□ -0.3
SEC61A1P61619 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.16□□□□□ -0.3
SEC61A1P61619 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.16□□□□□ -0.3
SEC61A1P61619 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.16□□□□□ -0.3
SEC61A1P61619 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 AL391825.1-201ENST00000457671 1364 ntBASIC13.16□□□□□ -0.3
SEC61A1P61619 PPT1-213ENST00000641319 2388 ntBASIC13.16□□□□□ -0.3
SEC61A1P61619 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 AC011474.4-201ENST00000623523 2076 ntBASIC13.16□□□□□ -0.3
SEC61A1P61619 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
SEC61A1P61619 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SEC61A1P61619 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SEC61A1P61619 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SEC61A1P61619 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
SEC61A1P61619 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.15□□□□□ -0.3
SEC61A1P61619 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.15□□□□□ -0.3
SEC61A1P61619 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SEC61A1P61619 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.15□□□□□ -0.3
SEC61A1P61619 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SEC61A1P61619 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
SEC61A1P61619 AC087499.6-201ENST00000411576 835 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms